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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs66941101 chr6:26530376 C/T ZFP57 chr6:29640169-29648887:- 0.79 7.83 3.08E-14 Box Plot
THCA rs66961617 chr2:132203501 CA/C CCDC74B chr2:130896860-130902707:- 0.36 6.54 1.57E-10 Box Plot
THCA rs6696471 chr1:24532067 G/A RIF1 chr2:152266397-152364527:+ 0.13 6.01 3.7E-9 Box Plot
THCA rs66971051 chr11:49569014 GA/G FOLH1B chr11:89372395-89431886:+ -0.35 -6.41 3.48E-10 Box Plot
THCA rs6697436 chr1:26545277 T/C GLRX chr5:95087023-95158709:- 0.3 5.9 6.75E-9 Box Plot
THCA rs66975207 chr6:26942146 A/C RNF5P1 chr8:38458179-38458718:- 0.77 6.78 3.48E-11 Box Plot
THCA rs66975207 chr6:26942146 A/C ZFP57 chr6:29640169-29648887:- 0.8 7.42 5.28E-13 Box Plot
THCA rs66975207 chr6:26942146 A/C ZNF389 chr6:28129551-28137375:+ -0.62 -6.13 1.82E-9 Box Plot
THCA rs6699611 chr1:61457297 A/T PNLIP chr10:118305443-118327367:+ -0.16 -6.13 1.85E-9 Box Plot
THCA rs670039 chr11:49242363 C/T FOLH1B chr11:89372395-89431886:+ 0.48 7.93 1.62E-14 Box Plot
THCA rs670090 chr11:77602673 A/G INTS4L1 chr7:64601603-64694600:+ 0.63 10.16 4.39E-22 Box Plot
THCA rs6701325 chr1:151213407 A/G PIPSL chr10:95717948-95721297:- 0.33 5.91 6.5E-9 Box Plot
THCA rs67034375 chr6:26618721 ACGAGGTCAGGAGTT/A ZNF322B chr9:99957633-99961910:- 0.73 15.29 2.86E-43 Box Plot
THCA rs67040724 chr6:27905509 T/C BTN3A2 chr6:26365387-26378548:+ -0.84 -11.97 4.55E-29 Box Plot
THCA rs67040724 chr6:27905509 T/C RNF5P1 chr8:38458179-38458718:- 0.72 6.32 6.1E-10 Box Plot